Thursday, December 20, 2012

Chromosome 'anchors' organize DNA during cell division

Chromosome 'anchors' organize DNA during cell division [ Back to EurekAlert! ] Public release date: 20-Dec-2012
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Contact: Andy Hoang
ahoang@salk.edu
619-861-5811
Salk Institute

Salk discovery of new role for telomeres in cellular growth may shed light on aging and age-related diseases

LA JOLLA, CA----For humans to grow and to replace and heal damaged tissues, the body's cells must continually reproduce, a process known as "cell division," by which one cell becomes two, two become four, and so on. A key question of biomedical research is how chromosomes, which are duplicated during cell division so that each daughter cell receives an exact copy of a person's genome, are arranged during this process.

Now, scientists at the Salk Institute have discovered a new characteristic of human cell division that may help explain how our DNA is organized in the nucleus as cells reproduce. They found that telomeres, molecular caps that protect the ends of the chromosomes, move to the outer edge of the cell's nucleus after they have been duplicated.

While the implications of this spatial reorganization of telomeres are not yet clear, the findings may shed light on how our genes are regulated and how gene expression programs are altered during cell division, an important step in understanding aging and diseases that stem from genetic mutations, such as cancer.

"What we discovered is that telomeres not only protect our chromosomes, they also help organize our genetic material in the nucleus," says Jan Karlseder, a professor in Salk's Molecular and Cell Biology Laboratory and the Donald and Darlene Shiley Chair. "This is important, because the three-dimensional position of DNA in the nucleus influences gene expression profiles and how the genome morphs over time."

Telomeres, a combination of proteins and DNA, are crucial in DNA replication, tumor suppression and aging. Every time a primary human cell divides, its telomeres get shorter, until critically short telomeres lead cells to self-destruct. Much of Karlseder's research has focused on understanding telomere dynamics in order to develop ways to influence the aging process, and as a result, restrict cancer cell growth.

In addition to exploring the involvement of telomeres in premature aging diseases and interactions between the DNA damage machinery and telomeres, Karlseder studies the role of telomeres during the cell cycle. Previous studies on human cells have shown that telomeres change positions during cell division, suggesting they might also play a role in organizing DNA in the nucleus. But these studies provided only isolated snapshots of telomeres at various stages of the cell cycle.

In their new study, the Salk researchers used advanced time-lapse live-cell confocal microscopy to track telomere movement in real time throughout the cell cycle. They followed the telomeres for 20 hours in living cells by labeling them with molecules that glowed under the microscope. They also recorded the movement of chromatin, a combination of DNA and proteins that forms chromosomes.

The scientists found that the telomeres moved to the outer periphery of the nuclear envelope of each daughter cell nucleus as they assemble after mitosis, the stage of cell division during which the cell's DNA is duplicated to provide each daughter cell with its own copy. By exploring the underlying molecular pathways, the researchers determined that interactions between two proteins, RAP1 and Sun1, seem to tether the telomeres to the nuclear envelope. Sun1 alone was also capable of attracting the telomeres to the nuclear envelope, suggesting the protein is essential for the process and that other elements might be able to replace RAP1 during tethering.

"The tethering of telomeres to the nuclear envelope may serve as an anchor point to reorganize chromatin after each cell division, so that our DNA is correctly situated for gene expression," Karlseder says. "This tethering could also play a role in the maintenance of telomeres, thereby influencing aging, cancer development and other disorders associated with DNA damage. We plan to explore these possibilities in future experiments."

###

Other Salk Institute researchers on the paper were Laure Crabbe, Anthony J. Cesare and James M. Kasuboski and James A.J. Fitzpatrick of the Waitt Advanced Biophotonics Center Core Facility.

The research was supported by the Glenn Foundation For Medical Research, the National Institutes of Health (Grant 5T32CA009370-29), the Robert John Sabo Trust and the Highland Street Foundation.



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Chromosome 'anchors' organize DNA during cell division [ Back to EurekAlert! ] Public release date: 20-Dec-2012
[ | E-mail | Share Share ]

Contact: Andy Hoang
ahoang@salk.edu
619-861-5811
Salk Institute

Salk discovery of new role for telomeres in cellular growth may shed light on aging and age-related diseases

LA JOLLA, CA----For humans to grow and to replace and heal damaged tissues, the body's cells must continually reproduce, a process known as "cell division," by which one cell becomes two, two become four, and so on. A key question of biomedical research is how chromosomes, which are duplicated during cell division so that each daughter cell receives an exact copy of a person's genome, are arranged during this process.

Now, scientists at the Salk Institute have discovered a new characteristic of human cell division that may help explain how our DNA is organized in the nucleus as cells reproduce. They found that telomeres, molecular caps that protect the ends of the chromosomes, move to the outer edge of the cell's nucleus after they have been duplicated.

While the implications of this spatial reorganization of telomeres are not yet clear, the findings may shed light on how our genes are regulated and how gene expression programs are altered during cell division, an important step in understanding aging and diseases that stem from genetic mutations, such as cancer.

"What we discovered is that telomeres not only protect our chromosomes, they also help organize our genetic material in the nucleus," says Jan Karlseder, a professor in Salk's Molecular and Cell Biology Laboratory and the Donald and Darlene Shiley Chair. "This is important, because the three-dimensional position of DNA in the nucleus influences gene expression profiles and how the genome morphs over time."

Telomeres, a combination of proteins and DNA, are crucial in DNA replication, tumor suppression and aging. Every time a primary human cell divides, its telomeres get shorter, until critically short telomeres lead cells to self-destruct. Much of Karlseder's research has focused on understanding telomere dynamics in order to develop ways to influence the aging process, and as a result, restrict cancer cell growth.

In addition to exploring the involvement of telomeres in premature aging diseases and interactions between the DNA damage machinery and telomeres, Karlseder studies the role of telomeres during the cell cycle. Previous studies on human cells have shown that telomeres change positions during cell division, suggesting they might also play a role in organizing DNA in the nucleus. But these studies provided only isolated snapshots of telomeres at various stages of the cell cycle.

In their new study, the Salk researchers used advanced time-lapse live-cell confocal microscopy to track telomere movement in real time throughout the cell cycle. They followed the telomeres for 20 hours in living cells by labeling them with molecules that glowed under the microscope. They also recorded the movement of chromatin, a combination of DNA and proteins that forms chromosomes.

The scientists found that the telomeres moved to the outer periphery of the nuclear envelope of each daughter cell nucleus as they assemble after mitosis, the stage of cell division during which the cell's DNA is duplicated to provide each daughter cell with its own copy. By exploring the underlying molecular pathways, the researchers determined that interactions between two proteins, RAP1 and Sun1, seem to tether the telomeres to the nuclear envelope. Sun1 alone was also capable of attracting the telomeres to the nuclear envelope, suggesting the protein is essential for the process and that other elements might be able to replace RAP1 during tethering.

"The tethering of telomeres to the nuclear envelope may serve as an anchor point to reorganize chromatin after each cell division, so that our DNA is correctly situated for gene expression," Karlseder says. "This tethering could also play a role in the maintenance of telomeres, thereby influencing aging, cancer development and other disorders associated with DNA damage. We plan to explore these possibilities in future experiments."

###

Other Salk Institute researchers on the paper were Laure Crabbe, Anthony J. Cesare and James M. Kasuboski and James A.J. Fitzpatrick of the Waitt Advanced Biophotonics Center Core Facility.

The research was supported by the Glenn Foundation For Medical Research, the National Institutes of Health (Grant 5T32CA009370-29), the Robert John Sabo Trust and the Highland Street Foundation.



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AAAS and EurekAlert! are not responsible for the accuracy of news releases posted to EurekAlert! by contributing institutions or for the use of any information through the EurekAlert! system.


Source: http://www.eurekalert.org/pub_releases/2012-12/si-co122012.php

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Wednesday, December 19, 2012

Who's zooming who? Frogs, fractals and the tree of life

Dec. 18, 2012 ? As ecologists assemble ever larger parts of the tree of life, whose evolutionary branches connect the millions of species on Earth, they need better ways of presenting and organising information. Now, biologist Dr James Rosindell of Imperial College London has developed a revolutionary way of visualising the tree of life. He will demonstrate his new software, which could evolve into a biological equivalent of Google Earth, at this week's British Ecological Society Annual Meeting at the University of Birmingham.

Inspired by fractals -- the beautiful, repeating and infinitely complex patterns commonly found in nature -- OneZoom will help ecologists solve the problem of how to present vast amounts of information. And by doing so in an attractive, accessible fashion it could also inspire members of the public.

Developed with Dr Luke Harmon of the University of Idaho, OneZoom is based on the simple idea that all life of Earth can be contained on one page, where users access the information by simply zooming in and out of different areas. According to Dr Rosindell: "It's very much like exploring a map, zooming in on areas of interest to provide further details. By using the zooming concept the amount of information that can be placed on the page is limitless."

To ensure there are interesting things to see at different scales of zoom, Dr Rosindell used fractal-based algorithms similar to those used to produce detailed zoomable images that -- like the Mandelbrot set -- resemble plants and trees. "The only difference is now these are more than just pretty pictures that are fun to explore, they also become goldmines of information," he explains.

Taking this approach solves the problems associated with existing methods, says Dr Rosindell: "These are four-fold: we can't display very large trees; we can't use our intuition easily when looking at large tree diagrams; there are limited ways to add information about species and their common ancestors on the tree; and the tree visualisations tend not to be beautiful. It's easy to overlook beauty in data visualisation, but making things beautiful and enticing is important if we want the public to get interested in science."

As well as allowing the tree of life to be visualised in an intuitive, beautiful and fun fashion, OneZoom could open up new and interactive ways of publishing scientific results, he predicts: "I call these IFIGs -- interactive fractal inspired graphs -- and I think interactive graphs will become commonplace in scientific work."

Rosindell's ultimate aim is a biological equivalent of Google Earth. International collaborations already exist to collect the data, but they need visualisation tools like OneZoom to bring them to life. "My dream is to create the 'Google Maps of biology': a single page built around the tree of life with all described species, living and extinct, plus photos, maps and information on evolutionary paths. And it's something I want to make available for free on the web as well as in apps, educational packages and customisable displays at zoos, museums and science centres."

Dr James Rosindell will present OneZoom on December 18, 2012 to the British Ecological Society's Annual Meeting at the University of Birmingham.

Video: http://www.onezoom.org/

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Source: http://feeds.sciencedaily.com/~r/sciencedaily/top_news/~3/ujJ5VAWm3iQ/121217234946.htm

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Iraqi President Talabani hospitalized for ill health

BAGHDAD (Reuters) - President Jalal Talabani, a Kurd who has been a pivotal mediator among Iraq's fractious Shi'ite, Sunni and Kurdish parties, was hospitalized in Baghdad because of a "health emergency", his office said on Tuesday.

Talabani's office gave no further details of his medical condition, but a senior source in his Patriotic Union of Kurdistan or PUK party said the president, who is 79, was admitted to hospital for exhaustion.

"A specialized medical team is taking care of him and a report will be issued later," the statement from the presidential office said.

Prime Minister Nuri al-Maliki visited Talabani at the Baghdad hospital on Tuesday.

Should Talabani be incapacitated, Iraq would lose an influential negotiator who often stepped in to ease tensions in the fragile power-sharing government, including during a recent attempt to push a vote of no confidence against Maliki.

He has been suffering from ill health this year and received medical treatment overseas several times in the last two years.

According to Iraq's constitution, the parliament should elect a new president if the post becomes vacant. Under Iraq's power-sharing deal the presidency should go to a Kurd while two deputy president positions are shared by a Sunni Muslim and a Shi'ite Muslim.

Mediation by Talabani recently helped reduce friction between Maliki's central government and the autonomous Kurdistan president, Masoud Barzani, in a dispute over oilfield rights and internal boundaries.

A veteran of the Kurdish guerrilla movement, Talabani survived wars, exile and infighting in northern Iraq to become the country's first Kurdish president a few years after the 2003 invasion that toppled Saddam Hussein.

(Reporting by Baghdad newsroom, Isabel Coles; writing by Patrick Markey; editing by Mark Heinrich)

Source: http://news.yahoo.com/iraqs-president-talabani-hospitalized-office-084809347.html

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the Shift Age! - David Houle - MediaBizBloggers.com



Published: December 18, 2012 at 06:56 AM GMT
Last Updated: December 18, 2012 at 06:56 AM GMT By David Houle

We have left the Information Age and entered the Shift Age. This new age is an era of transformation unparalleled in terms of the amount of change that will occur is the next 20-30 years.

As long time readers of this column know, I have been writing and speaking about the Shift Age since 2007 and my first book of that name was published exactly 5 years ago this month. In serendipitous celebration of that anniversary, my biggest and best book about the future of humanity is being published on January 1, 2013. Parts One and Two of that book, "Entering the Shift Age" are now available as a mini-eBook, "Welcome to the Shift Age" where I look at the new age, the twenty year period 1985-2005 and the three forces of the Shift Age.

The Threshold Decades ? 1985-2005

A threshold is a place of entering or beginning. It is also a place between two rooms. The Threshold Decades is the 20-year period between the room of what was and the room of what will be. This 20-year period was a time of incredible change, a time when our worldview, our accepted economic models and how we thought about almost everything changed. Just think all that came into being and then was spread around the world: personal computers, cable television, fax machines, cell phones, laptops and the of course the early stages of the Internet. This 20-year period was the time when most of the world moved from analogue to digital with incredible consequences particularly relative to computing, media and all forms of content.

Historians will look back on this 20-year period as a clear demarcation between the past and the future, a significant time bridge from the wonders and inventions of the 20th century and the incredible alterations for humanity in the 21st century. It was a time when the Three Forces of the Shift Age took shape and took off.

The Three Forces of the Shift Age

There are many forces at play in the world today. That said there are three dominant forces that upon reflection are the source of most of the transformative, disruptive and sometime overwhelming changes we are now experiencing.

The Flow to Global

The Flow to Global is far more than just the 15-20 year old global economy. Humanity is being reorganized around the global construct. We are entering the global stage of human evolution, nothing less. This means that the world "globalization" is no longer an economic term. It is a term that describes what is and will be occurring in most areas of human society now through the next 15-20 years. We are getting reorganized around all of us. This is truly the evolutionary next step for humanity.

The Flow to the Individual

The Flow to the Individual had its roots in the Threshold Decade, when, in the developed countries there was an explosion of choice. Television channels, radio stations, books published, web sites, even brands of toothpaste exploded in number. This meant that the power moved from the producer to the consumer, from the institution to the individual. We as individuals have more power than individuals have ever had before.

So, at the same time that we are flowing to a global reorganization we are becoming ever more powerful as individuals. This flow of power and shape to all of us and each of us has of course created extreme disruption to many of the institutional constructs that have been in place for the last 100 years.

Both the Flow to the Global and the Flow to the Individual have, are, and will be amplified by the single most powerful force at play in the world today, and one of the most powerful forces in history.

The Accelerating Connectedness of Humanity

Humanity has become connected at a level never before experienced. In 1985, at the beginning of the Threshold Decades, there were approximately 750,000 cell phone users in the world. During the first few years of the Shift Age, 2006-2010 there were almost twice as many new, first time cell phone users, 1.5 million, being activated every day!

There are now approximately 5.6 billion cell phone users in a global population of 7.1 billion, so we basically have cell phone ubiquity today. If I call someone 20 feet away from me, cell phone to cell phone, it will probably take about 5 seconds for her phone to ring. If I were to call someone on another continent 12,000 miles away, it might take an extra 2-3 seconds due to the relay of the signal off a satellite. So there is no time, distance or place any longer limiting human communication. That could not be said 5 years ago let alone 25 or 50 years ago. This has, for the first time altered the concept of place, certainly in human communications.

To read more about the Threshold Decades and the Three Forces of the Shift Age please go here to possibly order the inexpensive mini-eBook " Welcome to the Shift Age " To learn about the Agile Publishing Model, a new model for book publishing in the future, please go here http://www.sourcebooks.com/agilepublishing/the-shift-age-news/ .

Welcome to the Shift Age!

David Houle is a futurist, strategist and speaker. He has always been slightly ahead of the curve. Houle spent more than 20 years in media and entertainment. Most recently, David is a featured contributor to Oprah.com. Check is out here www.oprah.com/davidhoule. David can be contacted at David@DavidHoule.com.

Read all David?s MediaBizBloggers commentaries at Evolution Shift.

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The opinions and points of view expressed in this commentary are exclusively the views of the author and do not necessarily represent the views of MediaBizBloggers.com management or associated bloggers. MediaBizBloggers is an open thought leadership platform and readers may share their comments and opinions in response to all commentaries.

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Source: http://www.mediabizbloggers.com/media-biz-bloggers/Welcome-to-the-Shift-Age---David-Houle.html

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Retailer leaks next-gen AMD Radeon HD 8000 mobile graphics inside Asus Vivobook

Retailer leaks nextgen AMD Radeon HD 8000 graphics chip inside ASUS Vivobook

Give or take the odd roadmap, we're mostly in the dark about AMD's specific intentions for 2013. This spec sheet for an unannounced 13-inch Asus Vivobook U38DT drops a couple more crumbs, however, suggesting there'll be a fresh stack of Radeon HD 8000-series graphics chips before too long -- including a 8550M laptop variant with a gig of dedicated memory. It's hard to say anything definite beyond that, and in fact it's even possible that the 8550M will be a last-gen chip rebranded as part of next year's product range -- although that sort of behavior is more typical of NVIDIA. The laptop itself is very similar to the Trinity-powered Vivobook U38N we've already spotted at the FCC, and given that the retailer mentions delivery from the end of December, there's at least some possibility that this model is meant to tie-in with an official announcement at CES -- in which case we'll be right there to bring you a fuller update.

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Via: Ultrabook News, TechPowerUp

Source: Cyberport.de

Source: http://www.engadget.com/2012/12/17/amd-asus-vivobook-leak/

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Tuesday, December 18, 2012

Garmin smartphone apps updated with Foursquare integration, location-sharing via Glympse

Image

Garmin's StreetPilot Onboard and Navigon apps were recently updated to include public transport information and a parking finder, and a just-announced refresh will add even more navigational goodies: namely, integration with Foursquare and the location-sharing service Glympse. The Foursquare tie-in will help users find venues and access special deals -- and once a Foursquare account is linked, checking into locations can be done directly through the apps. Glympse, on the other hand, lets users share their location with contacts via email and text, with info on current location, ETA and even speed. Finally, the update brings iCloud support for syncing saved destinations across various Apple devices. Perhaps in light of the holiday hustle ahead of us, Garmin is offering the apps for 25 percent off until January 7th through App Store or Google Play. (Of course, the update is a free download for those who already have them.)

Continue reading Garmin smartphone apps updated with Foursquare integration, location-sharing via Glympse

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Source: http://www.engadget.com/2012/12/18/garmin-app-update-foursquare-glympse/

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Devil's Ford by Bret Harte

Sorry, Readability was unable to parse this page for content.

Source: http://www.gutenberg.org/ebooks/2286

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